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26044 Alpha-Globin Gene Analysis, Varies (ATHAL)

Alpha-Globin Gene Analysis, Varies (ATHAL)
Test Code: ATHALSO
Synonyms/Keywords

​Alpha Globin; Alpha Thalassemia; HBA1; Hemoglobin Bart; Hemoglobin-H Disease; Hydrops Fetalis; Thalassemia, Alpha; Alpha-Thalassemia; HBA2; AGPB

Test Components
Alpha-Globin Gene Analysis (ATHL)
Useful For

​Diagnosis of alpha-thalassemia

Prenatal diagnosis of deletional alpha-thalassemia

Carrier screening for individuals from high-risk populations for alpha-thalassemia

This test is not useful for diagnosis or confirmation of beta-thalassemia or hemoglobinopathies.

Specimen Requirements
Fasting Required Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
​No ​Whole Blood EDTA ​Lavender Top Tube (LTT) or Yellow Top Tube (ACD) ​Any Anticoagulant ​3 mL​1 mL
No ​Amniotic Fluid ​Sterile Container/Syringe ​20 mL​10 mL
Collection Processing Instructions

Specimen preferred to arrive within 96 hours of draw. ​

Invert several times to mix blood.  Send specimen in original tube.

For prenatal specimens only: If amniotic fluid (nonconfluent cultured cells) is received, amniotic fluid culture/genetic test will be added and charged separately.
For any prenatal specimen that is received, maternal cell contamination studies will be added.
 
Patient Preparation: A previous bone marrow transplant from an allogenic donor will interfere with testing. Call 800-533-1710 for instructions for testing patients who have received a bone marrow transplant.
  

This assay cannot be performed on chorionic villus specimens.

Point alterations are not detected by this assay. For detection of single point and other nondeletion variants, order WASEQ / Alpha Globin Gene Sequencing, Varies if clinically indicated.

Prenatal Specimens
Due to the complexity of prenatal testing, consultation with the laboratory is required for all prenatal testing.

All prenatal specimens must be accompanied by a maternal blood specimen; order MATCC / Maternal Cell Contamination, Molecular Analysis, Varies on the maternal specimen.

Specimen Stability Information
Specimen Type Temperature Time
​Whole Blood ​ ​Ambient (preferred) ​4 days
​Refrigerate 4 days
​Amniotic Fluid ​ ​Refrigerate (preferred)
​Ambient
Rejection Criteria
All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.
Interference

Hemoglobin electrophoresis should usually be done prior to this test to exclude other diagnoses or to identify nondeletion types of alpha-thalassemia.

Hemoglobin Constant Spring and alpha-thalassemia Saudi are the only nondeletion types of alpha-thalassemia that will be detected by this assay. This test is not useful for diagnosis or confirmation of beta-thalassemia or hemoglobinopathies.

In addition to disease-related probes, the multiplex ligation-dependent probe amplification technique utilizes probes localized to other chromosomal regions as internal controls. In certain circumstances, these control probes may detect other diseases or conditions for which this test was not specifically intended. Results of the control probes are not normally reported. However, in cases where clinically relevant information is identified, the ordering physician will be informed of the result and provided with recommendations for any appropriate follow-up testing.

Rare polymorphisms exist that could lead to false-negative or false-positive results. If results obtained do not match the clinical findings, additional testing should be considered.

Test results should be interpreted in the context of clinical findings, family history, and other laboratory data. Errors in our interpretation of results may occur if information given is inaccurate or incomplete.

This assay cannot be performed on chorionic villus specimens.

Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available Methodology/Instrumentation
​Mayo Clinic Laboratories ​Monday, Wednesday ​9 to 13 days Dosage Analysis by Polymerase Chain Reaction (PCR)/Multiplex Ligation-Dependent Probe Amplification (MLPA)/Luminex Technology
Reference Lab
Test Information

GENETICS TEST INFORMATION:

This test is for genetic deletions and duplications only.

The thalassemias are a group of inherited conditions characterized by decreased synthesis of one or more of the globin chains, resulting in an imbalance in the relative amounts of the alpha and beta chains. The excess normal chains precipitate in the cell, damaging the membrane and leading to premature red blood cell destruction. Additionally, the defect in hemoglobin synthesis produces a hypochromic, microcytic anemia. The frequency of thalassemia is due to the protective advantage against malaria that it gives carriers. Consequently, thalassemias are prevalent in populations from equatorial regions in the world where malaria is endemic.

Alpha-thalassemia is caused by decreased synthesis of alpha-globin chains. Four alpha-globin genes are normally present (2 on each chromosome 16). One, 2, 3, or 4 alpha-globin genes may be deleted or, less commonly, contain variants. Deletions account for approximately 90% of disease-causing alleles in alpha thalassemia. Phenotypically, these deletions result in 4 categories of disease expression:
-Deletion of 1 alpha-chain: Silent carrier state, with a normal phenotype
-Deletion of 2 alpha-chains: Alpha-thalassemia trait (alpha-1 thalassemia), with mild hematologic changes but no major clinical difficulties
-Deletion of 3 alpha-chains: Hemoglobin H disease, which is extremely variable but usually includes anemia due to hemolysis, jaundice, and hepatosplenomegaly
-Deletion of all 4 alpha-chains: Hemoglobin Bart, with hydrops fetalis and almost invariably in utero demise

Less frequently, alpha-thalassemia results from single point alterations, such as hemoglobin Constant Spring  (HBA2: c.427T >C). Note: these point alterations are not detected by this assay.

Alpha-thalassemia occurs in all ethnic groups but is especially common in individuals of Southeast Asian and African ancestry. It is also frequent in individuals of Mediterranean ancestry. The carrier frequency is estimated to be 1 in 20 for Southeast Asians, 1 in 30 for African Americans, and 1 in 30 to 1 in 50 for individuals of Mediterranean ancestry. Both deletional and nondeletional (caused by point alterations) forms of alpha-thalassemia are found in individuals with Mediterranean ancestry. Deletions in cis (deletions on the same chromosome) are rare in African or Mediterranean populations but are prevalent in Asian populations. Couples in which both partners carry deletions in cis are at risk of having a child with the fatal hemoglobin Bart hydrops fetalis syndrome.

Reference Range Information
An interpretive report will be provided. 
Interpretation

​An interpretive report will be provided. 

Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
​81269 ​1 ​Alpha-Globin Gene Analysis
​88235 ​1 ​Amniotic Fluid Culture ​if appropriate
​88240 ​1 ​Cryopreservation ​if appropriate
​81265 ​1 ​Maternal Cell Contamination ​if appropriate
Synonyms/Keywords

​Alpha Globin; Alpha Thalassemia; HBA1; Hemoglobin Bart; Hemoglobin-H Disease; Hydrops Fetalis; Thalassemia, Alpha; Alpha-Thalassemia; HBA2; AGPB

Test Components
Alpha-Globin Gene Analysis (ATHL)
Ordering Applications
Ordering Application Description
​Cerner ​Alpha-Globin Gene Analyisis (ATHAL)
​COM ​Alpha-Globin Gene Analyisis (ATHAL)
If the ordering application you are looking for is not listed, contact your local laboratory for assistance.
Specimen Requirements
Fasting Required Specimen Type Preferred Container/Tube Acceptable Container/Tube Specimen Volume Specimen Minimum Volume
(allows for 1 repeat)
Pediatric Minimum Volume
(no repeat)
​No ​Whole Blood EDTA ​Lavender Top Tube (LTT) or Yellow Top Tube (ACD) ​Any Anticoagulant ​3 mL​1 mL
No ​Amniotic Fluid ​Sterile Container/Syringe ​20 mL​10 mL
Collection Processing

Specimen preferred to arrive within 96 hours of draw. ​

Invert several times to mix blood.  Send specimen in original tube.

For prenatal specimens only: If amniotic fluid (nonconfluent cultured cells) is received, amniotic fluid culture/genetic test will be added and charged separately.
For any prenatal specimen that is received, maternal cell contamination studies will be added.
 
Patient Preparation: A previous bone marrow transplant from an allogenic donor will interfere with testing. Call 800-533-1710 for instructions for testing patients who have received a bone marrow transplant.
  

This assay cannot be performed on chorionic villus specimens.

Point alterations are not detected by this assay. For detection of single point and other nondeletion variants, order WASEQ / Alpha Globin Gene Sequencing, Varies if clinically indicated.

Prenatal Specimens
Due to the complexity of prenatal testing, consultation with the laboratory is required for all prenatal testing.

All prenatal specimens must be accompanied by a maternal blood specimen; order MATCC / Maternal Cell Contamination, Molecular Analysis, Varies on the maternal specimen.

Specimen Stability Information
Specimen Type Temperature Time
​Whole Blood ​ ​Ambient (preferred) ​4 days
​Refrigerate 4 days
​Amniotic Fluid ​ ​Refrigerate (preferred)
​Ambient
Rejection Criteria
All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.
Interference

Hemoglobin electrophoresis should usually be done prior to this test to exclude other diagnoses or to identify nondeletion types of alpha-thalassemia.

Hemoglobin Constant Spring and alpha-thalassemia Saudi are the only nondeletion types of alpha-thalassemia that will be detected by this assay. This test is not useful for diagnosis or confirmation of beta-thalassemia or hemoglobinopathies.

In addition to disease-related probes, the multiplex ligation-dependent probe amplification technique utilizes probes localized to other chromosomal regions as internal controls. In certain circumstances, these control probes may detect other diseases or conditions for which this test was not specifically intended. Results of the control probes are not normally reported. However, in cases where clinically relevant information is identified, the ordering physician will be informed of the result and provided with recommendations for any appropriate follow-up testing.

Rare polymorphisms exist that could lead to false-negative or false-positive results. If results obtained do not match the clinical findings, additional testing should be considered.

Test results should be interpreted in the context of clinical findings, family history, and other laboratory data. Errors in our interpretation of results may occur if information given is inaccurate or incomplete.

This assay cannot be performed on chorionic villus specimens.

Useful For

​Diagnosis of alpha-thalassemia

Prenatal diagnosis of deletional alpha-thalassemia

Carrier screening for individuals from high-risk populations for alpha-thalassemia

This test is not useful for diagnosis or confirmation of beta-thalassemia or hemoglobinopathies.

Test Components
Alpha-Globin Gene Analysis (ATHL)
Reference Range Information
An interpretive report will be provided. 
Interpretation

​An interpretive report will be provided. 

For more information visit:
Performing Laboratory Information
Performing Location Day(s) Test Performed Report Available Methodology/Instrumentation
​Mayo Clinic Laboratories ​Monday, Wednesday ​9 to 13 days Dosage Analysis by Polymerase Chain Reaction (PCR)/Multiplex Ligation-Dependent Probe Amplification (MLPA)/Luminex Technology
Reference Lab
For billing questions, see Contacts
Outreach CPTs
CPT Modifier
(if needed)
Quantity Description Comments
​81269 ​1 ​Alpha-Globin Gene Analysis
​88235 ​1 ​Amniotic Fluid Culture ​if appropriate
​88240 ​1 ​Cryopreservation ​if appropriate
​81265 ​1 ​Maternal Cell Contamination ​if appropriate
For most current information refer to the Marshfield Laboratory online reference manual.